County Schools in Kenya form the third tier of secondary schools; after National and Extra County schools, respectively. The schools admit students from majorly within the country. Admissions to these schools is done online by the Ministry of Education. The Schools are either of Mixed or single sex type.
Here are the County Schools in Trans Nzoia County:
| School Code | School Name | Category | Type |
| 23503301 | SABOTI SECONDARY SCHOOL | County | Boys |
| 23503302 | ST. MARY’S MACHEWA SECONDARY SCHOOL | County | Mixed |
| 23503310 | IMMACULATE HEART GIRLS HIGH SCHOOL SABOTI | County | Girls |
| 23528103 | KAPSARA SECONDARY SCHOOL | County | Mixed |
| 23528104 | ST CHRISTOPHER’S SCHOOL | County | Boys |
| 23528107 | WIYETA SECONDARY SCHOOL | County | Girls |
| 23528109 | ST. PAUL’S BOYS HIGH SCHOOL-SINOKO | County | Boys |
| 23528133 | HUTUTU FRIENDS GIRLS SECONDARY SCHOOL | County | Girls |
| 23528137 | IMMACULATE CONCEPTION GIRLS HIGH SCHOOL-MUKUYU KIT | County | Girls |
| 23528201 | ST. FRANCIS BOYS HIGH SCHOOL SUWERWA | County | Boys |
| 23528206 | ST PETERS MITO MBILI GIRLS SECONDARY SCHOOL | County | Girls |
| 23528208 | ST BENEDICTS SECONDARY SCHOOL KAPSIGILAI | County | Mixed |
| 23528214 | ST FRANCIS GIRLS HIGH SCHOOL – SUWERWA | County | Girls |
| 23528216 | A.I.C KIPKEIKEI GIRLS HIGH SCHOOL | County | Girls |
| 23529101 | KOLONGOLO SECONDARY SCHOOL | County | Boys |
| 23529102 | FRIENDS BOYS SCHOOL – KWANZA | County | Boys |
| 23529104 | NAMANJALALA SECONDARY SCHOOL | County | Mixed |
| 23529105 | BISHOP ALEXANDER MUGE SECONDARY SCHOOL | County | Girls |
| 23529106 | GIDEA SECONDARY SCHOOL | County | Mixed |
| 23529108 | KOBOS SECONDARY SCHOOL | County | Boys |
| 23529110 | ST. MAURICE HIGH SCHOOL – LUNYU | County | Boys |
| 23529122 | ST. MICHAELS GIRLS LIYAVO GIRLS’ DAY SECONDARY SCH | County | Girls |
| 23529131 | ST. FRANCIS KOLONGOLO GIRLS HIGH SCHOOL | County | Girls |
| 23529135 | ST. PATRICKS’ SECONDARY SCHOOL – MAKUNGA | County | Mixed |
| 23529141 | ST. MAURICE GIRLS HIGH SCHOOL-LUNYU | County | Girls |
| 23529150 | AIC KOBOS GIRLS HIGH SCHOOL | County | Girls |
| 23572101 | SABWANI SECONDARY SCHOOL | County | Girls |
| 23572208 | CHEPSALEI SECONDARY SCHOOL | County | Mixed |
| 23574113 | ST. TERESA’S BIKEKE GIRLS SECONDARY SCHOOL | County | Mixed |
| 23574123 | NYABOMO SDA SECONDARY SCHOOL | County | Mixed |
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